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 | Acceso al texto completo restringido a Biblioteca INIA Las Brujas. Por información adicional contacte bibliolb@inia.org.uy. |
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Registro completo
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Biblioteca (s) : |
INIA Las Brujas. |
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Fecha : |
18/04/2023 |
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Actualizado : |
18/04/2023 |
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Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
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Autor : |
RUBIO, L.; ARRUABARRENA, A.; SALVO, M.; CASTELLS, M.; BERTALMIO, A.; HERNÁNDEZ-RODRÍGUEZ, L.; BENÍTEZ-GALEANO, M.J.; MAESO, D.; COLINA, R.; RIVAS, F. |
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Afiliación : |
LETICIA PAOLA RUBIO CATTANI, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; ANA ARRUABARRENA PASCOVICH, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; MATÍAS SALVO, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; MATÍAS CASTELLS, Laboratorio de Virología Molecular, Centro Universitario Regional Litoral Norte (CENUR Litoral Norte), Universidad de la República, Rivera 1350, Salto, CP 50000, Uruguay; ANA MARIA BERTALMIO CASARIEGO, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; LESTER HERNÁNDEZ RODRÍGUEZ, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay.; MARÍA J. BENÍTEZ-GALEANO, Laboratorio de Virología Molecular, Centro Universitario Regional Litoral Norte (CENUR Litoral Norte), Universidad de la República, Rivera 1350, Salto, CP 50000, Uruguay; DIEGO CESAR MAESO TOZZI, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; RODNEY COLINA, Laboratorio de Virología Molecular, Centro Universitario Regional Litoral Norte (CENUR Litoral Norte), Universidad de la República, Rivera 1350, Salto, CP 50000, Uruguay; CARLOS FERNANDO RIVAS GRELA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay. |
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Título : |
Biological and molecular characterization of a resistance-breaking isolate of citrus tristeza virus from Uruguay and its effects on Poncirus trifoliata growth performance. |
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Fecha de publicación : |
2023 |
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Fuente / Imprenta : |
Archives of Virology, 2023, Volume 168, Issue 4, article 123. doi: https://doi.org/10.1007/s00705-023-05749-y |
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ISSN : |
0304-8608 |
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DOI : |
10.1007/s00705-023-05749-y |
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Idioma : |
Inglés |
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Notas : |
Article history: Received 24 November 2022; Accepted 11 February 2023; Published online 29 March 2023. -- Correspondence author: Rubio, L.; Instituto Nacional de Investigación Agropecuaria (INIA), Estación Experimental INIA Salto Grande. Camino al Terrible, Salto, Uruguay; email:lrubio@inia.org.uy -- Funding: This research was funded by the National Institute of Agricultural Research (INIA), Uruguay (project CT-22), through the National Program of Citrus Research. |
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Contenido : |
Resistance-breaking (RB) isolates of citrus tristeza virus (CTV) can replicate and move systemically in Poncirus trifoliata, a rootstock widely used for management of decline caused by CTV and other purposes. In Uruguay, severe CTV isolates are prevalent, and an RB isolate (designated as RB-UY1) was identified. In order to predict the implications of this genotype circulating in citrus crops grafted on trifoliate rootstocks, the aim of this work was to determine the biological and molecular characteristics of this isolate, the efficiency of its transmission by Toxoptera citricida, and its effects on plant growth performance of P. trifoliata. Our results show that RB-UY1 can be classified as a mild isolate, that it is phylogenetically associated with the RB1 group, and that it is efficiently transmitted by T. citrida. They also suggest that the RB-UY1 isolate should not affect the performance of citrus crops grafted on trifoliate rootstocks, although some growth parameters of P. trifoliata seedlings were affected four years after inoculation. © 2023, The Author(s), under exclusive licence to Springer-Verlag GmbH Austria, part of Springer Nature. |
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Palabras claves : |
Aphid transmission; Biological characterization; Growth performance; Poncirus trifoliata; RB isolate. |
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Asunto categoría : |
F30 Genética vegetal y fitomejoramiento |
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Marc : |
LEADER 02703naa a2200325 a 4500
001 1064041
005 2023-04-18
008 2023 bl uuuu u00u1 u #d
022 $a0304-8608
024 7 $a10.1007/s00705-023-05749-y$2DOI
100 1 $aRUBIO, L.
245 $aBiological and molecular characterization of a resistance-breaking isolate of citrus tristeza virus from Uruguay and its effects on Poncirus trifoliata growth performance.$h[electronic resource]
260 $c2023
500 $aArticle history: Received 24 November 2022; Accepted 11 February 2023; Published online 29 March 2023. -- Correspondence author: Rubio, L.; Instituto Nacional de Investigación Agropecuaria (INIA), Estación Experimental INIA Salto Grande. Camino al Terrible, Salto, Uruguay; email:lrubio@inia.org.uy -- Funding: This research was funded by the National Institute of Agricultural Research (INIA), Uruguay (project CT-22), through the National Program of Citrus Research.
520 $aResistance-breaking (RB) isolates of citrus tristeza virus (CTV) can replicate and move systemically in Poncirus trifoliata, a rootstock widely used for management of decline caused by CTV and other purposes. In Uruguay, severe CTV isolates are prevalent, and an RB isolate (designated as RB-UY1) was identified. In order to predict the implications of this genotype circulating in citrus crops grafted on trifoliate rootstocks, the aim of this work was to determine the biological and molecular characteristics of this isolate, the efficiency of its transmission by Toxoptera citricida, and its effects on plant growth performance of P. trifoliata. Our results show that RB-UY1 can be classified as a mild isolate, that it is phylogenetically associated with the RB1 group, and that it is efficiently transmitted by T. citrida. They also suggest that the RB-UY1 isolate should not affect the performance of citrus crops grafted on trifoliate rootstocks, although some growth parameters of P. trifoliata seedlings were affected four years after inoculation. © 2023, The Author(s), under exclusive licence to Springer-Verlag GmbH Austria, part of Springer Nature.
653 $aAphid transmission
653 $aBiological characterization
653 $aGrowth performance
653 $aPoncirus trifoliata
653 $aRB isolate
700 1 $aARRUABARRENA, A.
700 1 $aSALVO, M.
700 1 $aCASTELLS, M.
700 1 $aBERTALMIO, A.
700 1 $aHERNÁNDEZ-RODRÍGUEZ, L.
700 1 $aBENÍTEZ-GALEANO, M.J.
700 1 $aMAESO, D.
700 1 $aCOLINA, R.
700 1 $aRIVAS, F.
773 $tArchives of Virology, 2023, Volume 168, Issue 4, article 123. doi: https://doi.org/10.1007/s00705-023-05749-y
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INIA Las Brujas (LB) |
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Registro completo
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Biblioteca (s) : |
INIA La Estanzuela. |
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Fecha actual : |
28/09/2020 |
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Actualizado : |
28/09/2020 |
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Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
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Circulación / Nivel : |
Internacional - -- |
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Autor : |
SILVA, R.P.; ESPIGOLAN, R.; BERTON, M.P.; STAFUZZA, N.B.; SANTOS, F.S.; NEGREIROS, M.P.; SCHUCHMANN, R.K.; RODRIGUEZ, J.D.; LÔBO, R.B.; BANCHERO, G.; PEREIRA, A.S.C.; BERGMANN, J.A.G.; BALDI, F. |
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Afiliación : |
ROSIANE P. SILVA, Department of Veterinary Medicine, College of Animal Science and Food Engineer, University of São Paulo (USP), 225 Duque de Caxias Norte Avenue, Jardim Elite, 13635-900, Pirassununga/SP, Brazil.; RAFAEL ESPIGOLAN, Department of Veterinary Medicine, College of Animal Science and Food Engineer, University of São Paulo (USP), 225 Duque de Caxias Norte Avenue, Jardim Elite, 13635-900, Pirassununga/SP, Brazil.; MARIANA PIATTO BERTON, Department of Animal Science, College of Agricultural and Veterinarian Sciences, São Paulo State University (UNESP), Via de Acesso Professor Paulo Donato Castellane s/n, 14884-900, Jaboticabal/SP, Brazil.; NEDENIA STAFUZZA, Department of Animal Science, College of Agricultural and Veterinarian Sciences, São Paulo State University (UNESP), Via de Acesso Professor Paulo Donato Castellane s/n, 14884-900, Jaboticabal/SP, Brazil.; F. S. SANTOS, Department of Veterinary Medicine, College of Animal Science and Food Engineer, University of São Paulo (USP), 225 Duque de Caxias Norte Avenue, Jardim Elite, 13635-900, Pirassununga/SP, Brazil.; Department of Veterinary Medicine, College of Animal Science and Food Engineer, University of São Paulo (USP), 225 Duque de Caxias Norte Avenue, Jardim Elite, 13635-900, Pirassununga/SP, Brazil.; Department of Animal Science, College of Agricultural and Veterinarian Sciences, São Paulo State University (UNESP), Via de Acesso Professor Paulo Donato Castellane s/n, 14884-900, Jaboticabal/SP, Brazil.; Department of Animal Science, College of Agricultural and Veterinarian Sciences, São Paulo State University (UNESP), Via de Acesso Professor Paulo Donato Castellane s/n, 14884-900, Jaboticabal/SP, Brazil.; RAYSILDO B. LÔBO, Nacional Association of Breeders and Researchers (ANCP), 463 João Godoy Street, Jardim América, 14020-230, Ribeirão Preto/SP, Brazil.; GEORGGET ELIZABETH BANCHERO HUNZIKER, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; ANGÉLICA SIMONE CRAVO PEREIRA, Department of Veterinary Medicine, College of Animal Science and Food Engineer, University of São Paulo (USP), 225 Duque de Caxias Norte Avenue, Jardim Elite, 13635-900, Pirassununga/SP, Brazil.; JOSÉ AURÉLIO GARCIA BERGMANN, Department of Animal Science, Minas Gerais Federal University (UFMG), Escola de Veterinária da UFMG, Pampulha, 31270-901, Caixa Postal 567, Belo Horizonte/MG, Brazil.; FERNANDO BALDI, Department of Animal Science, College of Agricultural and Veterinarian Sciences, São Paulo State University (UNESP), Via de Acesso Professor Paulo Donato Castellane s/n, 14884-900, Jaboticabal/SP, Brazil. |
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Título : |
Genetic parameters and genomic regions associated with calving ease in primiparous Nellore heifers. |
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Fecha de publicación : |
2020 |
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Fuente / Imprenta : |
Livestock Science, October 2020, Volume 240, Article number 104183. Doi: https://doi.org/10.1016/j.livsci.2020.104183 |
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DOI : |
10.1016/j.livsci.2020.104183 |
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Idioma : |
Inglés |
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Notas : |
Article history: Received 19 February 2020 /Received in revised form 25 June 2020 /Accepted 1 August 2020/Available online 02 August 2020. /Corresponding author: E-mail address: fernandobaldiuy@gmail.com (F. Baldi). This work was supported by the São Paulo Research Foundation -
FAPESP through grant #2018/18921-9, grant #2017/10493-5 and grant #2019/10438-0 for authors Rafael Espigolan, Mariana P. Berton
and Nedenia B. Stafuzza, respectively. |
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Contenido : |
ABSTRACT: The aim of this study was to estimate genetic parameters and to identify genomic regions associated with the calving ease (CE) in precocious Nellore heifers. A total of 1,277 CE phenotypes were collected and scored into two categories: i- non assisted calving, categorized as success (1) and ii- assisted calving where heifers required any form of assistance or intervention to give birth, categorized as failure (2). A pedigree structure containing the identification of the animal's sire and dam was used, with the relationship matrix comprising a total of 6,511
animals. Genotypic data from 1,201 animals were obtained using low-density panel (Clarifide Nelore 3.1) encompassing over 29,001 single nucleotide polymorphisms (SNP) markers. A threshold sire-maternal grandsire model (S-MGS) was used to estimate the genetic parameters, which included sire, maternal grandsire and residual effects as random effects and the fixed effects of contemporary groups (farm and year of calving, sex) and birth weight of the calf as covariable (linear effect). Genomic breeding values were estimated using an animal model with the direct and maternal genetic variances which were previously obtained by means of a S-MGS threshold model. The direct and maternal heritability estimates for CE were obtained considering the covariance of direct and maternal effects fixed as zero. Regions that accounted for more than 0.5% of the additive genetic variance were used. The direct and maternal heritability estimates for CE were low (0.18) and moderate (0.39)
respectively, indicating that genetic progress for this trait is feasible, and so, it would respond favorably to direct selection. Genes identified within the significant windows, such as CA8, FAM110B, TOX, ARID1A, RBM15, HSF1 and PLAG1 were found to be related with maternal and direct effects on CE. Gene enrichment analysis revealed processes that might directly influence fetal processes involved in female pregnancy and stress response. These results should help to better understand the genetic and physiological mechanisms regulating placenta development and fetal development, and this information might be useful for future genomic studies in Nellore cattle. MenosABSTRACT: The aim of this study was to estimate genetic parameters and to identify genomic regions associated with the calving ease (CE) in precocious Nellore heifers. A total of 1,277 CE phenotypes were collected and scored into two categories: i- non assisted calving, categorized as success (1) and ii- assisted calving where heifers required any form of assistance or intervention to give birth, categorized as failure (2). A pedigree structure containing the identification of the animal's sire and dam was used, with the relationship matrix comprising a total of 6,511
animals. Genotypic data from 1,201 animals were obtained using low-density panel (Clarifide Nelore 3.1) encompassing over 29,001 single nucleotide polymorphisms (SNP) markers. A threshold sire-maternal grandsire model (S-MGS) was used to estimate the genetic parameters, which included sire, maternal grandsire and residual effects as random effects and the fixed effects of contemporary groups (farm and year of calving, sex) and birth weight of the calf as covariable (linear effect). Genomic breeding values were estimated using an animal model with the direct and maternal genetic variances which were previously obtained by means of a S-MGS threshold model. The direct and maternal heritability estimates for CE were obtained considering the covariance of direct and maternal effects fixed as zero. Regions that accounted for more than 0.5% of the additive genetic variance were used. The direct and maternal heritabili... Presentar Todo |
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Palabras claves : |
BEEF CATTLE; CANDIDATE GENES; DISTOCIA; FUNCTIONAL ANALYSES; REPRODUCTION TRAITS. |
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Thesagro : |
GANADO VACUNO. |
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Asunto categoría : |
L01 Ganadería |
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Marc : |
LEADER 03747naa a2200361 a 4500
001 1061351
005 2020-09-28
008 2020 bl uuuu u00u1 u #d
024 7 $a10.1016/j.livsci.2020.104183$2DOI
100 1 $aSILVA, R.P.
245 $aGenetic parameters and genomic regions associated with calving ease in primiparous Nellore heifers.$h[electronic resource]
260 $c2020
500 $aArticle history: Received 19 February 2020 /Received in revised form 25 June 2020 /Accepted 1 August 2020/Available online 02 August 2020. /Corresponding author: E-mail address: fernandobaldiuy@gmail.com (F. Baldi). This work was supported by the São Paulo Research Foundation - FAPESP through grant #2018/18921-9, grant #2017/10493-5 and grant #2019/10438-0 for authors Rafael Espigolan, Mariana P. Berton and Nedenia B. Stafuzza, respectively.
520 $aABSTRACT: The aim of this study was to estimate genetic parameters and to identify genomic regions associated with the calving ease (CE) in precocious Nellore heifers. A total of 1,277 CE phenotypes were collected and scored into two categories: i- non assisted calving, categorized as success (1) and ii- assisted calving where heifers required any form of assistance or intervention to give birth, categorized as failure (2). A pedigree structure containing the identification of the animal's sire and dam was used, with the relationship matrix comprising a total of 6,511 animals. Genotypic data from 1,201 animals were obtained using low-density panel (Clarifide Nelore 3.1) encompassing over 29,001 single nucleotide polymorphisms (SNP) markers. A threshold sire-maternal grandsire model (S-MGS) was used to estimate the genetic parameters, which included sire, maternal grandsire and residual effects as random effects and the fixed effects of contemporary groups (farm and year of calving, sex) and birth weight of the calf as covariable (linear effect). Genomic breeding values were estimated using an animal model with the direct and maternal genetic variances which were previously obtained by means of a S-MGS threshold model. The direct and maternal heritability estimates for CE were obtained considering the covariance of direct and maternal effects fixed as zero. Regions that accounted for more than 0.5% of the additive genetic variance were used. The direct and maternal heritability estimates for CE were low (0.18) and moderate (0.39) respectively, indicating that genetic progress for this trait is feasible, and so, it would respond favorably to direct selection. Genes identified within the significant windows, such as CA8, FAM110B, TOX, ARID1A, RBM15, HSF1 and PLAG1 were found to be related with maternal and direct effects on CE. Gene enrichment analysis revealed processes that might directly influence fetal processes involved in female pregnancy and stress response. These results should help to better understand the genetic and physiological mechanisms regulating placenta development and fetal development, and this information might be useful for future genomic studies in Nellore cattle.
650 $aGANADO VACUNO
653 $aBEEF CATTLE
653 $aCANDIDATE GENES
653 $aDISTOCIA
653 $aFUNCTIONAL ANALYSES
653 $aREPRODUCTION TRAITS
700 1 $aESPIGOLAN, R.
700 1 $aBERTON, M.P.
700 1 $aSTAFUZZA, N.B.
700 1 $aSANTOS, F.S.
700 1 $aNEGREIROS, M.P.
700 1 $aSCHUCHMANN, R.K.
700 1 $aRODRIGUEZ, J.D.
700 1 $aLÔBO, R.B.
700 1 $aBANCHERO, G.
700 1 $aPEREIRA, A.S.C.
700 1 $aBERGMANN, J.A.G.
700 1 $aBALDI, F.
773 $tLivestock Science, October 2020, Volume 240, Article number 104183. Doi: https://doi.org/10.1016/j.livsci.2020.104183
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